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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103027150CARD- and ANK-containing Inflammasome Adaptor Protein. (748 aa)    
Predicted Functional Partners:
rnf146
Ring finger protein 146.
    
 0.669
Wdr90
Uncharacterized protein.
    
 0.636
ENSAMXP00000034895
Spi-2 proto-oncogene.
      
 0.614
agap3
ArfGAP with GTPase domain, ankyrin repeat and PH domain 3.
    
 0.580
sptan1
Spectrin alpha, non-erythrocytic 1.
   
 0.537
axin1
Axin 1.
    
 0.534
LOC103042974
Axin 2 (conductin, axil).
    
 0.534
LOC103030717
Uncharacterized protein.
    
 0.534
axin2
Uncharacterized protein.
    
 0.534
MPEG1
Macrophage expressed 1.
      
 0.460
Your Current Organism:
Astyanax mexicanus
NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.