Boll protein (Astyanax mexicanus) - STRING interaction network

Nodes:

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second shell of interactors

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proteins of unknown 3D structure

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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[Homology]

Score

Boll

RRM domain-containing protein. (255 aa)

Predicted Functional Partners:

cdc20

0.672

uba5

0.650

fau

0.627

Pum1

0.577

Ncbp2

0.576

cpeb1

0.573

LOC103045388

0.573

NCBP1

0.569

LOC103027270

0.535

snrpg

0.533

Your Current Organism:

Astyanax mexicanus

NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Boll	LOC103027270	ENSAMXP00000005184	ENSAMXP00000030712	RRM domain-containing protein.	Serine and arginine rich splicing factor 2a.	0.535
Boll	LOC103045388	ENSAMXP00000005184	ENSAMXP00000031387	RRM domain-containing protein.	Cytoplasmic polyadenylation element binding protein 1a.	0.573
Boll	NCBP1	ENSAMXP00000005184	ENSAMXP00000016845	RRM domain-containing protein.	Nuclear cap binding protein subunit 1.	0.569
Boll	Ncbp2	ENSAMXP00000005184	ENSAMXP00000039041	RRM domain-containing protein.	Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...]	0.576
Boll	Pum1	ENSAMXP00000005184	ENSAMXP00000040039	RRM domain-containing protein.	Pumilio RNA-binding family member 1.	0.577
Boll	cdc20	ENSAMXP00000005184	ENSAMXP00000019884	RRM domain-containing protein.	Cell division cycle 20 homolog.	0.672
Boll	cpeb1	ENSAMXP00000005184	ENSAMXP00000004933	RRM domain-containing protein.	Cytoplasmic polyadenylation element binding protein 1b.	0.573
Boll	fau	ENSAMXP00000005184	ENSAMXP00000042455	RRM domain-containing protein.	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.	0.627
Boll	snrpg	ENSAMXP00000005184	ENSAMXP00000030512	RRM domain-containing protein.	Small nuclear ribonucleoprotein G.	0.533
Boll	uba5	ENSAMXP00000005184	ENSAMXP00000015298	RRM domain-containing protein.	Ubiquitin-like modifier activating enzyme 5.	0.650
LOC103027270	Boll	ENSAMXP00000030712	ENSAMXP00000005184	Serine and arginine rich splicing factor 2a.	RRM domain-containing protein.	0.535
LOC103027270	NCBP1	ENSAMXP00000030712	ENSAMXP00000016845	Serine and arginine rich splicing factor 2a.	Nuclear cap binding protein subunit 1.	0.785
LOC103027270	Ncbp2	ENSAMXP00000030712	ENSAMXP00000039041	Serine and arginine rich splicing factor 2a.	Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...]	0.771
LOC103045388	Boll	ENSAMXP00000031387	ENSAMXP00000005184	Cytoplasmic polyadenylation element binding protein 1a.	RRM domain-containing protein.	0.573
LOC103045388	Pum1	ENSAMXP00000031387	ENSAMXP00000040039	Cytoplasmic polyadenylation element binding protein 1a.	Pumilio RNA-binding family member 1.	0.473
NCBP1	Boll	ENSAMXP00000016845	ENSAMXP00000005184	Nuclear cap binding protein subunit 1.	RRM domain-containing protein.	0.569
NCBP1	LOC103027270	ENSAMXP00000016845	ENSAMXP00000030712	Nuclear cap binding protein subunit 1.	Serine and arginine rich splicing factor 2a.	0.785
NCBP1	Ncbp2	ENSAMXP00000016845	ENSAMXP00000039041	Nuclear cap binding protein subunit 1.	Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...]	0.999
NCBP1	snrpg	ENSAMXP00000016845	ENSAMXP00000030512	Nuclear cap binding protein subunit 1.	Small nuclear ribonucleoprotein G.	0.959
Ncbp2	Boll	ENSAMXP00000039041	ENSAMXP00000005184	Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...]	RRM domain-containing protein.	0.576