close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING newly available directed regulatory networks a new typed view showing functional, physical, and regulatory edges in one network new clustering options and cluster-based layouts … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W5KCF5_ASTMXUncharacterized protein. (271 aa)    
Predicted Functional Partners:
vav2
Vav 2 guanine nucleotide exchange factor.
     
 
0.900
VAV1
Vav guanine nucleotide exchange factor 1.
     
 
0.900
ENSAMXP00000043171
Calponin-homology (CH) domain-containing protein.
 
      0.848
LOC103034053
Rac family small GTPase 1a.
   
 0.839
LOC111192386
Rac family small GTPase 3b.
   
 0.839
ENSAMXP00000041200
Uncharacterized protein.
   
 0.839
rac3
Rac family small GTPase 3a.
   
 0.839
LOC111193007
Rac family small GTPase 2.
   
 0.839
LOC111192975
Rac family small GTPase 1b.
   
 0.839
LOC103023232
Ras homolog family member Ga.
   
 0.815
Your Current Organism:
Astyanax mexicanus
NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish
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