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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W5KCJ9_ASTMXTUB like protein 1a; Belongs to the TUB family. (343 aa)    
Predicted Functional Partners:
IFT122
Intraflagellar transport 122.
    
 0.710
ttc21b
Tetratricopeptide repeat domain 21B.
    
 0.701
Wdr19
WD repeat domain 19.
    
 0.697
ift140
Intraflagellar transport 140 homolog (Chlamydomonas).
    
 0.696
W5LPP4_ASTMX
WD repeat-containing protein 35.
    
 0.676
gpr161
G protein-coupled receptor 161; Belongs to the G-protein coupled receptor 1 family.
     
 0.608
ttc21a
Tetratricopeptide repeat domain 21A.
    
 0.582
LOC103023559
Retinoschisin 1a.
   
 
 0.457
aanat
Arylalkylamine N-acetyltransferase 1.
   
  
 0.433
W5KM98_ASTMX
Protein kinase, cAMP-dependent, regulatory, type II, alpha, B.
   
  0.423
Your Current Organism:
Astyanax mexicanus
NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish
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