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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mfsd9Major facilitator superfamily domain containing 9. (461 aa)    
Predicted Functional Partners:
mfsd10
Major facilitator superfamily domain containing 10.
      
0.584
W5KRF6_ASTMX
SVOP-like.
   
  
 0.581
svop
SV2 related protein a.
   
  
 0.581
aagab
Alpha and gamma adaptin binding protein.
      
 0.580
mfsd13a
Major facilitator superfamily domain containing 13A.
      
 0.576
Unc93a
Unc-93 homolog A.
      
 0.575
unc93b1
Unc-93 homolog B1, TLR signaling regulator.
      
 0.572
inpp4a
Inositol polyphosphate-4-phosphatase type I Aa.
      
 0.566
mfsd6l
Major facilitator superfamily domain containing 6-like.
      
 0.547
LOC103027014
Major facilitator superfamily domain containing 2B.
      
 0.519
Your Current Organism:
Astyanax mexicanus
NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish
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