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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tacr3Tachykinin receptor 3a; Belongs to the G-protein coupled receptor 1 family. (403 aa)    
Predicted Functional Partners:
LOC103044130
Tachykinin 3a.
    
 0.985
LOC103040187
G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.
  
  
 
0.901
LOC103047822
Tachykinin receptor 3-like; Belongs to the G-protein coupled receptor 1 family.
  
  
 
0.901
LOC103045202
Guanine nucleotide binding protein (G protein), alpha 14a.
    
 0.784
LOC103042808
Uncharacterized protein.
    
 0.784
LOC111194736
Uncharacterized protein.
    
 0.765
Tac1
Tachykinin 1.
    
 0.765
ENSAMXP00000028058
Tachykinin 3b.
    
 0.758
LOC111191807
Guanine nucleotide binding protein (G protein), alpha 14.
    
 0.747
Sdhaf3
Succinate dehydrogenase complex assembly factor 3.
    
 0.597
Your Current Organism:
Astyanax mexicanus
NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.