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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC111196449AA_permease_C domain-containing protein. (682 aa)    
Predicted Functional Partners:
ppil4
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides.
  
  
 0.486
slc3a1
Solute carrier family 3 member 1.
   
 0.471
SCARF2
Scavenger receptor class F member 2.
    
 0.447
slc15a4
Solute carrier family 15 member 4.
   
 
 0.443
thap7
THAP domain containing 7.
    
 0.442
SLC7A5
Solute carrier family 7 member 5.
  
 
 0.427
LOC103024422
Solute carrier family 3 member 2b.
   
 0.406
LOC103045737
Solute carrier family 3 member 2a.
   
 0.406
LOC103026381
Si:dkey-202g17.3.
   
 0.406
aifm3
Apoptosis inducing factor mitochondria associated 3.
  
  
 0.405
Your Current Organism:
Astyanax mexicanus
NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.