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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103037239Uncharacterized protein; Belongs to the cytochrome P450 family. (497 aa)    
Predicted Functional Partners:
LOC103031034
Cytochrome P450, family 3, subfamily A, polypeptide 65.
  
0.936
LOC103027280
Uncharacterized protein; Belongs to the cytochrome P450 family.
  
0.931
ephx2
Epoxide hydrolase 2, cytoplasmic.
  
 0.920
LOC103032979
Cytochrome P450, family 2, subfamily U, polypeptide 1; Belongs to the cytochrome P450 family.
  
 
 
0.914
ptgs1
Prostaglandin-endoperoxide synthase 1.
   
 
 0.903
ENSAMXP00000047343
Uncharacterized protein.
   
 0.903
alox5
Arachidonate 5-lipoxygenase a.
    
  0.902
LOC103037595
Arachidonate 12-lipoxygenase.
    
  0.902
Gpx3
Glutathione peroxidase; Belongs to the glutathione peroxidase family.
   
 
 0.902
LOC103042613
Zgc:152891.
    
  0.902
Your Current Organism:
Astyanax mexicanus
NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.