Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC103027102ISY1 splicing factor homolog. (285 aa)    
Predicted Functional Partners:
bud31
BUD31 homolog.
   
 0.998
crnkl1
Crooked neck pre-mRNA splicing factor 1.
   
 0.998
aqr
Aquarius intron-binding spliceosomal factor.
    
 0.996
xab2
XPA binding protein 2.
    
 0.996
prpf19
Pre-mRNA processing factor 19.
    
 0.996
Ppie
Peptidyl-prolyl cis-trans isomerase E; Catalyzes the cis-trans isomerization of proline imidic peptide bonds in proteins; Belongs to the cyclophilin-type PPIase family. PPIase E subfamily.
   
  0.994
snw1
SNW domain containing 1.
    
 0.992
ZNF830
Zinc finger protein 830.
    
  0.988
cdc40
Cell division cycle 40 homolog (S. cerevisiae).
    
 0.977
Dhx38
DEAH (Asp-Glu-Ala-His) box polypeptide 38.
    
 0.969
Your Current Organism:
Astyanax mexicanus
NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish
Server load: medium (44%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.