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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W5KDJ8_ASTMXJunction plakoglobin b. (709 aa)    
Predicted Functional Partners:
ctnnbip1
Catenin, beta interacting protein 1.
    
 0.917
csnk1a1
Casein kinase 1, alpha 1; Belongs to the protein kinase superfamily.
   
 0.869
LOC103034575
Catenin, beta 2.
  
 
0.868
skp1
S-phase kinase-associated protein 1; Belongs to the SKP1 family.
   
 0.868
ctnnb1
Catenin (cadherin-associated protein), beta 1.
  
 
0.868
ccdc130
Coiled-coil domain containing 130.
   
   0.860
apc2
APC regulator of WNT signaling pathway 2.
   
 0.856
Apc
APC regulator of WNT signaling pathway.
   
 0.856
LOC103034091
Desmocollin 2 like; Component of intercellular desmosome junctions. Involved in the interaction of plaque proteins and intermediate filaments mediating cell-cell adhesion.
   
 0.850
LOC103026956
Catenin (cadherin-associated protein), alpha 1.
   
 0.849
Your Current Organism:
Astyanax mexicanus
NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish
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