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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W5KDT9_ASTMXFibronectin 1a. (2159 aa)    
Predicted Functional Partners:
UNC79
Unc-79 homolog, NALCN channel complex subunit.
    
 0.756
ENSAMXP00000049934
Uncharacterized protein.
      
 0.692
Vcan
Versican b.
   
 0.584
sdc4
Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family.
    
 
 0.584
vtn
Vitronectin b.
   
  
 0.546
LOC103043894
Vitronectin a.
   
  
 0.546
dcn
Decorin; May affect the rate of fibrils formation.
    
 0.541
LOC103038989
Vinculin a.
     
 0.535
LOC103035083
Vinculin b.
     
 0.535
fgf2
Fibroblast growth factor; Belongs to the heparin-binding growth factors family.
   
 0.524
Your Current Organism:
Astyanax mexicanus
NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.