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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103045417Dihydrodiol dehydrogenase (dimeric), like. (334 aa)    
Predicted Functional Partners:
ephx1
Epoxide hydrolase; Biotransformation enzyme that catalyzes the hydrolysis of arene and aliphatic epoxides to less reactive and more water soluble dihydrodiols by the trans addition of water. Belongs to the peptidase S33 family.
   
 
 0.916
LOC103035339
Aldo-keto reductase family 1, member B1 (aldose reductase), tandem duplicate 2.
  
 
 0.913
LOC103045107
GFO_IDH_MocA domain-containing protein.
  
  
 
0.901
rgn
Regucalcin.
  
 
 0.700
galk2
Galactokinase 2.
  
 
 0.689
Galk1
Galactokinase 1.
  
 
 0.689
TGDS
TDP-glucose 4,6-dehydratase.
  
 
 0.661
kars1
Lysine--tRNA ligase.
  
    0.604
ENSAMXP00000032191
Arylacetamide deacetylase.
  
  
 0.573
W5KCV1_ASTMX
Sorbitol dehydrogenase.
  
 
 0.527
Your Current Organism:
Astyanax mexicanus
NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish
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