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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GUF1Translation factor GUF1, mitochondrial; Promotes mitochondrial protein synthesis. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Binds to mitochondrial ribosomes in a GTP-dependent manner. (627 aa)    
Predicted Functional Partners:
mrpl32
Mitochondrial ribosomal protein L32.
  
 
 0.945
mrps9
Mitochondrial ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.
  
 
 0.940
rpl23
Ribosomal protein L23; Belongs to the universal ribosomal protein uL14 family.
   
 
 0.939
rpl11
Ribosomal protein L11; Belongs to the universal ribosomal protein uL5 family.
   
 
 0.939
rps3
Ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
   
 
 0.938
rps11
Ribosomal protein S11; Belongs to the universal ribosomal protein uS17 family.
   
 
 0.938
Rps18
Ribosomal protein S18.
    
 
 0.936
Mrpl20
Mitochondrial ribosomal protein L20; Belongs to the bacterial ribosomal protein bL20 family.
  
 
 0.935
Mrps6
Mitochondrial ribosomal protein S6.
  
 
 0.934
mrpl13
Mitochondrial ribosomal protein L13.
 
 
 0.907
Your Current Organism:
Astyanax mexicanus
NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.