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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W5KEL7_ASTMXZinc finger protein 131. (536 aa)    
Predicted Functional Partners:
W5KNA4_ASTMX
EMSY transcriptional repressor, BRCA2 interacting.
    
 
 0.602
ENSAMXP00000037182
Regulator of chromosome condensation 1.
    
 0.584
W5KC33_ASTMX
Ubiquitin-like domain-containing protein.
    
 0.546
poln
HAUS augmin-like complex, subunit 3.
   
  
 0.546
haus5
HAUS augmin-like complex, subunit 5.
      
 0.509
haus7
HAUS augmin-like complex, subunit 7.
      
 0.504
uhrf2
Uncharacterized protein.
    
 0.477
uhrf1
Ubiquitin-like with PHD and ring finger domains 1.
    
 0.477
haus4
HAUS augmin-like complex, subunit 4.
    
 
 0.454
Sin3b
SIN3 transcription regulator family member B.
    
 
 0.444
Your Current Organism:
Astyanax mexicanus
NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish
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