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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W5KET5_ASTMXCugbp, Elav-like family member 2. (543 aa)    
Predicted Functional Partners:
ENSAMXP00000032403
Zgc:55733.
   
 
 0.686
ENSAMXP00000049087
Heterogeneous nuclear ribonucleoprotein C.
   
 
 0.686
LOC103047438
RRM domain-containing protein.
    
 
 0.541
LOC103026935
RALY RNA binding protein like.
    
 
 0.541
LOC103040524
Uncharacterized protein.
    
 
 0.541
LOC103022898
Muscleblind-like splicing regulator 1.
   
 
 0.469
W5KVW5_ASTMX
BicC family RNA binding protein 1a.
   
 
 0.415
bicc1
BicC family RNA binding protein 1b.
   
 
 0.415
LOC103039934
Bicaudal C homolog 2.
   
 
 0.415
W5K7J1_ASTMX
Methenyltetrahydrofolate synthetase domain containing.
   
    0.408
Your Current Organism:
Astyanax mexicanus
NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish
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