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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
arl14epADP-ribosylation factor-like 14 effector protein. (224 aa)    
Predicted Functional Partners:
Atf7ip
Activating transcription factor 7 interacting protein.
    
 
 0.904
atf7ip2
Activating transcription factor 7 interacting protein 2.
    
 
 0.858
LOC103028156
SET domain bifurcated histone lysine methyltransferase 1a.
    
 
 0.819
W5L9Z5_ASTMX
SET domain bifurcated histone lysine methyltransferase 1b.
    
 
 0.819
LOC103045481
SET domain bifurcated histone lysine methyltransferase 2.
    
 
 0.819
KIF21A
Kinesin family member 21A; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
   
  
 0.698
Suox
Sulfite oxidase.
      
 0.693
Pdrg1
P53 and DNA-damage regulated 1.
      
 0.575
naa50
N(alpha)-acetyltransferase 50, NatE catalytic subunit.
      
 0.545
Nhlrc2
NHL repeat containing 2.
      
 0.518
Your Current Organism:
Astyanax mexicanus
NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish
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