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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
taf6lTAF6-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor. (642 aa)    
Predicted Functional Partners:
taf12
TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor.
   
 0.985
taf11
TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor.
    
 0.983
taf8
TAF8 RNA polymerase II, TATA box binding protein (TBP)-associated factor.
    
 0.983
taf7l
TAF7 RNA polymerase II, TATA box binding protein (TBP)-associated factor.
    
 0.983
taf2
TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor.
    
 0.983
ENSAMXP00000054367
Transcription initiation factor TFIID subunit.
    
 0.982
supt20h
SPT20 homolog, SAGA complex component.
    
 0.979
supt7l
SPT7 like, STAGA complex gamma subunit.
    
 0.979
sgf29
SAGA complex associated factor 29.
    
 0.976
taf13
TATA-box binding protein associated factor 13.
    
 0.975
Your Current Organism:
Astyanax mexicanus
NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.