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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
osbpl11Oxysterol-binding protein; Belongs to the OSBP family. (724 aa)    
Predicted Functional Partners:
Osbpl9
Oxysterol-binding protein; Belongs to the OSBP family.
    
  
0.698
katnal2
Katanin p60 ATPase-containing subunit A-like 2; Severs microtubules in vitro in an ATP-dependent manner. This activity may promote rapid reorganization of cellular microtubule arrays.
   
 
 0.603
asb16
Ankyrin repeat and SOCS box containing 16.
    
 0.524
Lrrc20
Leucine rich repeat containing 20.
      
 0.489
LOC103021391
Leucine rich repeat containing 14B.
      
 0.487
Vcp
Zgc:136908; Belongs to the AAA ATPase family.
   
 0.468
W5KVF8_ASTMX
Ankyrin repeat and SOCS box-containing 12a.
    
 0.456
rhoq
Ras homolog family member Q.
    
  0.445
Rhoh
Ras homolog family member H.
    
  0.445
rhoj
Ras homolog family member J.
    
  0.445
Your Current Organism:
Astyanax mexicanus
NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish
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