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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dhx37DEAH (Asp-Glu-Ala-His) box polypeptide 37. (1157 aa)    
Predicted Functional Partners:
UTP14C
UTP14C small subunit processome component.
   
 0.952
ddx49
DEAD (Asp-Glu-Ala-Asp) box polypeptide 49; Belongs to the DEAD box helicase family.
   
 0.940
Utp3
UTP3 small subunit processome component.
   
 0.929
W5LL02_ASTMX
WD repeat domain 46.
   
 0.918
krr1
KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.
   
 0.918
noc4l
Nucleolar complex associated 4 homolog.
   
 0.899
nol6
Nucleolar protein 6.
   
 0.896
utp18
WD_REPEATS_REGION domain-containing protein.
   
 0.891
nop14
NOP14 nucleolar protein homolog (yeast).
 
 
 0.889
emg1
EMG1 N1-specific pseudouridine methyltransferase.
   
 0.888
Your Current Organism:
Astyanax mexicanus
NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish
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