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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W5KFM9_ASTMXSHANK-associated RH domain interacting protein. (377 aa)    
Predicted Functional Partners:
rbck1
RanBP-type and C3HC4-type zinc finger containing 1.
   
0.976
LOC103029459
Sharpin and rbck1 related.
  
0.976
W5LI45_ASTMX
Tumor necrosis factor receptor superfamily, member 1a.
    
 0.975
ripk1
Receptor (TNFRSF)-interacting serine-threonine kinase 1, like.
    
 0.974
LOC103040600
Si:dkey-181m9.8.
    
 0.963
LOC103041009
Tumor necrosis factor b (TNF superfamily, member 2).
    
 0.963
rnf31
Uncharacterized protein.
    
 0.963
LOC103042649
Uncharacterized protein.
    
 0.963
birc2
Baculoviral IAP repeat containing 2.
    
 0.953
xiap
X-linked inhibitor of apoptosis.
    
 0.950
Your Current Organism:
Astyanax mexicanus
NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish
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