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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103034955Myosin light chain kinase family, member 4b. (667 aa)    
Predicted Functional Partners:
W5KA75_ASTMX
Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.
   
 
 
0.908
CALML6
Calmodulin like 6.
   
 0.796
calm2
Calmodulin 2b, (phosphorylase kinase, delta); Belongs to the calmodulin family.
   
 0.763
myl7
Myosin, light chain 7, regulatory.
   
 0.760
LOC103022187
Myosin, light chain 9a, regulatory.
   
 0.757
LOC103039566
Uncharacterized protein.
   
 0.757
ENSAMXP00000045035
Uncharacterized protein.
   
 0.757
LOC103045271
Myosin, light chain 9b, regulatory.
   
 0.757
LOC103021650
Myosin, light chain 6, alkali, smooth muscle and non-muscle.
   
 0.746
LOC103026687
Myosin, light chain 4, alkali; atrial, embryonic.
   
 0.746
Your Current Organism:
Astyanax mexicanus
NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish
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