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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W5KFU0_ASTMXZinc finger protein 366. (590 aa)    
Predicted Functional Partners:
ptpra
Protein tyrosine phosphatase receptor type A.
     
 0.703
ubox5
U-box domain containing 5.
     
 0.691
Ddrgk1
DDRGK domain containing 1.
      
 0.678
ENSAMXP00000043100
Threonine synthase-like 2.
      
 0.664
Gnrh2
Gonadoliberin; Stimulates the secretion of gonadotropins. Belongs to the GnRH family.
    
 0.651
lzts3
Leucine zipper, putative tumor suppressor family member 3b.
      
 0.651
ENSAMXP00000040707
POU domain, class 5, transcription factor 3.
    
 0.617
tada3
Transcriptional adaptor 3 (NGG1 homolog, yeast)-like.
    
 
 0.590
FASTKD5
FAST kinase domains 5.
      
 0.571
LOC103033864
Homeobox domain-containing protein.
    
 
 0.555
Your Current Organism:
Astyanax mexicanus
NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.