close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
eml3EMAP like 3. (995 aa)    
Predicted Functional Partners:
W5LET4_ASTMX
MAD2 mitotic arrest deficient-like 1 (yeast).
   
 0.754
ENSAMXP00000033034
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
   
 0.740
ift140
Intraflagellar transport 140 homolog (Chlamydomonas).
    
 0.725
mad1l1
Mitotic arrest deficient 1 like 1.
    
 0.707
taf12
TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor.
   
 0.688
LOC103030866
TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor.
    
 0.688
bub3
BUB3 mitotic checkpoint protein.
   
 0.678
W5KMF3_ASTMX
Cleavage and polyadenylation specific factor 1.
   
 0.675
bub1
BUB1 mitotic checkpoint serine/threonine kinase.
   
 0.673
tex10
Testis expressed 10.
   
 0.655
Your Current Organism:
Astyanax mexicanus
NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish
Server load: medium (42%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.