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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mixl1Mix paired-like homeobox. (323 aa)    
Predicted Functional Partners:
LOC103043286
Forkhead box H1.
   
 0.657
sdhd
Succinate dehydrogenase [ubiquinone] cytochrome b small subunit; Membrane-anchoring subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q); Belongs to the CybS family.
    
 0.639
LOC103038161
T-box transcription factor Ta.
   
 0.638
W5K922_ASTMX
T-box transcription factor Tb.
   
 0.623
W5KE90_ASTMX
Cactin.
    
 0.622
TIMM22
Translocase of inner mitochondrial membrane 22.
    
 0.622
cisd2
CDGSH iron sulfur domain 2.
    
 0.622
timm10
Translocase of inner mitochondrial membrane 10 homolog (yeast).
   
 0.617
LOC103024144
SRY-box transcription factor 32.
   
 
 0.592
LOC103021321
SRY-box transcription factor 17.
   
 
 0.550
Your Current Organism:
Astyanax mexicanus
NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.