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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W5KGF2_ASTMXEFR3 homolog Bb (S. cerevisiae). (776 aa)    
Predicted Functional Partners:
Ttc7a
Tetratricopeptide repeat domain 7A.
   
 
 0.688
ENSAMXP00000049812
Tetratricopeptide repeat domain 7B.
   
 
 0.688
W5L8B6_ASTMX
Phosphatidylinositol 4-kinase, catalytic, alpha b; Belongs to the PI3/PI4-kinase family.
   
 
 0.531
ENSAMXP00000039122
Phosphatidylinositol 4-kinase, catalytic, alpha a; Belongs to the PI3/PI4-kinase family.
   
 
 0.531
ENSAMXP00000042908
Uncharacterized protein.
   
 
 0.531
mcm8
Minichromosome maintenance 8 homologous recombination repair factor; Belongs to the MCM family.
   
 
  0.510
rps3a
40S ribosomal protein S3a; Belongs to the eukaryotic ribosomal protein eS1 family.
    
 
 0.463
fam126a
Family with sequence similarity 126 member A.
      
 0.439
pi4kb
Phosphatidylinositol 4-kinase, catalytic, beta; Belongs to the PI3/PI4-kinase family.
      
 0.408
Your Current Organism:
Astyanax mexicanus
NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.