close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W5KGY8_ASTMXEcotropic viral integration site 5a. (552 aa)    
Predicted Functional Partners:
akap17a
A kinase (PRKA) anchor protein 17A.
      
 0.424
LOC103040096
TBC1 domain family, member 7.
      
 0.407
mrpl30
Mitochondrial ribosomal protein L30.
      
 0.406
TBC1D13
TBC1 domain family member 13.
     
 0.406
rab11a
RAB11a, member RAS oncogene family.
    
 0.405
W5LR63_ASTMX
RAB11a, member RAS oncogene family, like.
    
 0.405
LOC103047600
RAB11B, member RAS oncogene family, b.
    
 0.405
LOC111194513
RAB11B, member RAS oncogene family, b.
    
 0.405
Your Current Organism:
Astyanax mexicanus
NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.