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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W5KH13_ASTMXMitochondrial calcium uptake 2. (383 aa)    
Predicted Functional Partners:
micu1
Mitochondrial calcium uptake 1.
    
0.986
LOC103023443
Single-pass membrane protein with aspartate-rich tail 1b.
    
 0.951
smdt1
Single-pass membrane protein with aspartate-rich tail 1a.
    
 0.951
Mcu
Mitochondrial calcium uniporter.
    
 0.921
LOC103042391
MCU domain-containing protein.
    
 0.921
LOC103030403
Mitochondrial calcium uptake family, member 3b.
   
0.814
LOC103047478
Prohibitin.
    
 0.798
LOC103035142
Prohibitin.
    
 0.798
phb
Prohibitin.
    
 0.703
LOC103039460
Uncharacterized protein.
      
 0.692
Your Current Organism:
Astyanax mexicanus
NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.