Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Slc6a5Solute carrier family 6 member 5. (421 aa)    
Predicted Functional Partners:
slc6a9
Transporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family.
     
  0.952
LOC103041735
Glycine receptor, beta a; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
   
  
 0.677
ENSAMXP00000037793
Low density lipoprotein receptor-related protein 4.
      
 0.652
LOC103036524
Developing brain homeobox 1a.
      
 0.651
Prmt3
Protein arginine methyltransferase 3; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family.
   
  
 0.621
slc32a1
Solute carrier family 32 member 1.
   
  
 0.617
htatip2
HIV-1 Tat interactive protein 2.
      
 0.608
evx2
Even-skipped homeobox 2.
      
 0.592
glra1
Glycine receptor, alpha 1; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
   
  
 0.578
Tectb
Tectorin beta.
      
 0.538
Your Current Organism:
Astyanax mexicanus
NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish
Server load: medium (56%) [HD]