Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
LOC103046886Plexin domain containing 2. (516 aa)    
Predicted Functional Partners:
LOC103033979
ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6; Belongs to the glycosyltransferase 29 family.
      
 0.634
arl5b
ADP-ribosylation factor-like 8; Belongs to the small GTPase superfamily. Arf family.
      
 0.538
W5L1C6_ASTMX
Calcium channel, voltage-dependent, beta 2b.
      
 0.497
LOC103035300
Calcium channel, voltage-dependent, beta 2a.
      
 0.497
ENSAMXP00000051206
Plexin C1.
      
 0.495
stx7
Syntaxin 7-like; Belongs to the syntaxin family.
      
 0.474
Kmt2e
Lysine (K)-specific methyltransferase 2E.
      
 0.470
ENSAMXP00000051141
Lysine (K)-specific methyltransferase 2E.
      
 0.470
mysm1
Myb-like, SWIRM and MPN domains 1.
      
 0.420
tubgcp3
Gamma-tubulin complex component; Gamma-tubulin complex is necessary for microtubule nucleation at the centrosome; Belongs to the TUBGCP family.
      
 0.420
Your Current Organism:
Astyanax mexicanus
NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish
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