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The next version of STRING is ready for use in your analyses: updated networks across STRING newly available directed regulatory networks a new typed view showing functional, physical, and regulatory edges in one network new clustering options and cluster-based layouts … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC111194470Monoacylglycerol O-acyltransferase 3b. (342 aa)    
Predicted Functional Partners:
LOC103031398
O-acyltransferase.
    
 0.962
Plpp4
Phospholipid phosphatase 4.
     
 0.940
PNLIPRP2
Triacylglycerol lipase; Belongs to the AB hydrolase superfamily. Lipase family.
     
 0.936
LOC103023613
PNPLA domain-containing protein.
   
 
 0.915
LOC103023312
Patatin-like phospholipase domain containing 3.
   
 
 0.915
pnpla2
Patatin-like phospholipase domain containing 2.
   
 
 0.915
mogat2
Monoacylglycerol O-acyltransferase 2.
  
  
0.907
W5L5V5_ASTMX
PLAT domain-containing protein.
     
 0.905
LOC103035469
Monoacylglycerol O-acyltransferase 3a.
  
  
 
0.905
LOC103038270
Carboxylic ester hydrolase; Belongs to the type-B carboxylesterase/lipase family.
   
 
 0.905
Your Current Organism:
Astyanax mexicanus
NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish
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