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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W5KIE5_ASTMXUncharacterized protein; Belongs to the peptidase S1 family. (763 aa)    
Predicted Functional Partners:
W5KJW0_ASTMX
Complement component 5.
   
 0.705
LOC103043236
Complement factor properdin.
   
 0.686
ENSAMXP00000050791
Complement component c3b, tandem duplicate 2.
   
 0.629
W5KAG1_ASTMX
Complement 4B (Chido blood group).
   
 0.616
LOC103045695
Complement component 4.
   
 0.616
ENSAMXP00000033017
Complement component c3a, duplicate 1.
   
 0.616
ENSAMXP00000051568
Anaphylatoxin-like domain-containing protein.
   
 0.616
W5K3K3_ASTMX
MET proto-oncogene, receptor tyrosine kinase.
    
  0.585
mst1r
Macrophage stimulating 1 receptor b.
    
  0.585
W5LTS7_ASTMX
Macrophage stimulating 1 receptor a.
    
  0.585
Your Current Organism:
Astyanax mexicanus
NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish
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