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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yes1Tyrosine-protein kinase. (546 aa)    
Predicted Functional Partners:
LOC103043249
Tyrosine-protein kinase.
  
0.940
fer
Tyrosine-protein kinase; Belongs to the protein kinase superfamily. Tyr protein kinase family. Fes/fps subfamily.
   
 
0.937
ctnnd1
Catenin (cadherin-associated protein), delta 1.
    
 0.908
LOC103029125
Tyrosine-protein kinase.
  
  
 
0.901
matk
Tyrosine-protein kinase.
  
0.666
LOC103033740
Tyrosine-protein kinase.
  
0.659
CSK
Tyrosine-protein kinase.
  
0.659
ENSAMXP00000054113
Phosphoprotein membrane anchor with glycosphingolipid microdomains 1.
    
 0.615
Syk
Tyrosine-protein kinase.
  
0.610
SEMA4D
Semaphorin 4D; Belongs to the semaphorin family.
     
 0.606
Your Current Organism:
Astyanax mexicanus
NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish
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