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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W5KIS2_ASTMXApoptosis antagonizing transcription factor. (535 aa)    
Predicted Functional Partners:
nop14
NOP14 nucleolar protein homolog (yeast).
   
 
 0.998
nol10
Nucleolar protein 10.
   
 
 0.998
nat10
RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein THUMPD1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation.
   
 
 0.998
UTP14C
UTP14C small subunit processome component.
   
 
 0.998
Ngdn
Neuroguidin, EIF4E binding protein.
   
 
 0.997
Bms1
BMS1 ribosome biogenesis factor.
   
 
 0.997
wdr43
WD repeat domain 43.
   
 
 0.997
W5LL02_ASTMX
WD repeat domain 46.
   
 
 0.997
utp18
WD_REPEATS_REGION domain-containing protein.
   
 
 0.996
bysl
Bystin-like.
   
 
 0.996
Your Current Organism:
Astyanax mexicanus
NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish
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