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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
zdhhc21Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family. (264 aa)    
Predicted Functional Partners:
zdhhc2
Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.
     
0.582
zdhhc16
Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.
     
0.552
zdhhc13
Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.
      
0.548
Nos1
Nitric oxide synthase; Produces nitric oxide (NO).
   
  0.543
LOC103031688
Nitric oxide synthase; Produces nitric oxide (NO).
   
  0.543
NOS2
Nitric oxide synthase; Produces nitric oxide (NO).
   
  0.543
wrn
WRN RecQ like helicase.
    
 0.538
zdhhc17
Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.
      
0.532
Zdhhc6
Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.
   
 
0.526
W5LAJ3_ASTMX
Zinc finger, DHHC-type containing 8b.
      
 0.519
Your Current Organism:
Astyanax mexicanus
NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish
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