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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
washc3WASH complex subunit 3. (207 aa)    
Predicted Functional Partners:
washc1
WAS protein family homolog 1.
    
 0.966
washc5
WASH complex subunit 5.
    
 0.937
washc4
WASH complex subunit 4.
    
 0.911
Washc2c
CAP-ZIP_m domain-containing protein.
    
 
 0.877
LOC103023435
Heat shock factor binding protein 1a.
    
 
 0.877
W5LKM2_ASTMX
Heat shock factor binding protein 1b.
    
 
 0.877
ENSAMXP00000035269
CAP-ZIP_m domain-containing protein.
    
 
 0.736
LOC103037334
Zgc:153184.
    
 
 0.736
vps35
Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.
    
 
 0.581
lrrc61
Leucine rich repeat containing 61.
      
 0.576
Your Current Organism:
Astyanax mexicanus
NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish
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