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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cryabCrystallin, alpha B, b; Belongs to the small heat shock protein (HSP20) family. (172 aa)    
Predicted Functional Partners:
hspb2
Heat shock protein, alpha-crystallin-related, b2; Belongs to the small heat shock protein (HSP20) family.
  
 
0.763
LOC103042223
Crystallin, beta A1a; Belongs to the beta/gamma-crystallin family.
   
 
 0.722
LOC103026281
Uncharacterized protein; Belongs to the synuclein family.
    
 
 0.716
crybb2
Crystallin, beta B2; Belongs to the beta/gamma-crystallin family.
   
 
 0.714
bag3
BCL2 associated athanogene 3.
   
 
 0.692
LOC103024139
Heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 2.
   
 0.665
hsp90ab1
Heat shock protein 90, alpha (cytosolic), class B member 1.
   
 0.665
LOC103029863
Heat shock protein, alpha-crystallin-related, b15; Belongs to the small heat shock protein (HSP20) family.
  
0.665
LOC103033891
Crystallin, gamma S2; Belongs to the beta/gamma-crystallin family.
   
 
 0.657
hspb8
Heat shock protein b8; Belongs to the small heat shock protein (HSP20) family.
   
0.654
Your Current Organism:
Astyanax mexicanus
NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish
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