STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AOPEPAminopeptidase O (putative). (761 aa)    
Predicted Functional Partners:
krr1
KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.
   
  
 0.617
Suox
Sulfite oxidase.
      
 0.611
dennd1a
DENN/MADD domain containing 1A.
      
 0.610
wdr82
WD repeat domain 82.
      
 0.583
oma1
OMA1 zinc metallopeptidase.
     
 0.536
usp3
Ubiquitin carboxyl-terminal hydrolase.
    
 
 0.535
W5L8E4_ASTMX
Si:ch211-282b22.1.
      
 0.531
W5KNM3_ASTMX
SUN domain-containing protein.
    
 
 0.512
ENSAMXP00000029807
SUN domain-containing protein.
    
 
 0.512
dnajc1
DnaJ (Hsp40) homolog, subfamily C, member 1.
   
 
 0.506
Your Current Organism:
Astyanax mexicanus
NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish
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