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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W5KJQ6_ASTMXVWFA domain-containing protein. (473 aa)    
Predicted Functional Partners:
ENSAMXP00000046566
Uncharacterized protein.
 
     0.909
ENSAMXP00000050218
Uncharacterized protein.
 
     0.755
fam20b
FAM20B glycosaminoglycan xylosylkinase.
   
 
  0.465
LOC111191755
Cytochrome c oxidase subunit 7C.
    
 
 0.456
PET117
PET117 cytochrome c oxidase chaperone.
      
 0.453
calhm2
Calcium homeostasis modulator family member 2, tandem duplicate 1.
   
    0.447
c23h1orf109
C19h1orf109 homolog (H. sapiens).
   
    0.447
ENSAMXP00000039716
CWC25 spliceosome associated protein homolog.
   
    0.447
lix1
Limb and CNS expressed 1.
   
    0.446
LIX1L
Limb and CNS expressed 1 like.
   
    0.446
Your Current Organism:
Astyanax mexicanus
NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish
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