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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103043236Complement factor properdin. (437 aa)    
Predicted Functional Partners:
ENSAMXP00000033017
Complement component c3a, duplicate 1.
   
 0.964
ENSAMXP00000030380
Hemicentin 2.
 
      0.710
W5KIE5_ASTMX
Uncharacterized protein; Belongs to the peptidase S1 family.
   
 0.686
W5KIJ6_ASTMX
Uncharacterized protein; Belongs to the peptidase S1 family.
   
 0.686
LOC103039688
Uncharacterized protein; Belongs to the peptidase S1 family.
   
 0.686
LOC103046310
Si:ch1073-280e3.1; Belongs to the peptidase S1 family.
   
 0.669
W5KAG1_ASTMX
Complement 4B (Chido blood group).
   
 0.654
LOC103045695
Complement component 4.
   
 0.654
ENSAMXP00000050791
Complement component c3b, tandem duplicate 2.
   
 0.654
ENSAMXP00000051568
Anaphylatoxin-like domain-containing protein.
   
 0.654
Your Current Organism:
Astyanax mexicanus
NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.