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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mst1Macrophage stimulating 1; Belongs to the peptidase S1 family. Plasminogen subfamily. (710 aa)    
Predicted Functional Partners:
W5LTS7_ASTMX
Macrophage stimulating 1 receptor a.
    
 0.842
W5K3K3_ASTMX
MET proto-oncogene, receptor tyrosine kinase.
    
 0.801
mst1r
Macrophage stimulating 1 receptor b.
    
 0.801
W5LR38_ASTMX
Hepsin; Belongs to the peptidase S1 family.
  
 
 
0.654
HGFAC
HGF activator.
   
0.650
LOC103024868
Serine peptidase inhibitor, Kunitz type 1 b.
    
 0.642
spint1
Serine peptidase inhibitor, Kunitz type 1 a.
    
 0.642
gab1
GRB2-associated binding protein 1.
    
 0.630
ENSAMXP00000041303
Uncharacterized protein.
    
 0.572
LOC103047885
Serine peptidase inhibitor, Kunitz type, 2.
    
 0.572
Your Current Organism:
Astyanax mexicanus
NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish
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