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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
strn4Striatin, calmodulin binding protein 4. (708 aa)    
Predicted Functional Partners:
Strip1
Striatin interacting protein 1.
    
 
 0.740
ENSAMXP00000052465
Striatin interacting protein 2.
    
 
 0.735
LOC103036086
CTTNBP2 N-terminal like a.
   
 
 0.696
cttnbp2nl
CTTNBP2 N-terminal like b.
   
 
 0.691
LOC103032850
Protein phosphatase 2, regulatory subunit A, beta a.
   
 
 0.683
W5LG66_ASTMX
Protein phosphatase 2, regulatory subunit A, beta b.
   
 
 0.683
LOC103040199
Uncharacterized protein.
   
 
 0.669
LOC103042482
MOB family member 4, phocein.
   
 
 0.669
sike1
Suppressor of IKBKE 1.
    
 
 0.658
slmap
Sarcolemma associated protein a.
    
 0.658
Your Current Organism:
Astyanax mexicanus
NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.