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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fgl1Fibrinogen-like 1. (312 aa)    
Predicted Functional Partners:
apoh
Apolipoprotein H.
   
 0.742
fgg
Fibrinogen gamma chain.
   
   
0.645
ENSAMXP00000036158
Fibrinogen C-terminal domain-containing protein.
   
  
0.479
LOC111194573
Uncharacterized protein.
 
 
  
 0.479
hsd17b10
Hydroxysteroid (17-beta) dehydrogenase 10; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
      
 0.472
arrdc2
Arrestin domain containing 2.
      
 0.437
kansl2
KAT8 regulatory NSL complex subunit 2.
    
 0.428
creg1
Cellular repressor of E1A-stimulated genes 1; Belongs to the CREG family.
      
 0.418
f2
Coagulation factor II (thrombin); Belongs to the peptidase S1 family.
   
  0.405
Your Current Organism:
Astyanax mexicanus
NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish
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