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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W5KKR7_ASTMXCeramide transporter 1a. (562 aa)    
Predicted Functional Partners:
W5KE19_ASTMX
Casein kinase 1, gamma 2a; Belongs to the protein kinase superfamily.
    
 0.620
csnk1g2
Casein kinase 1 gamma 2; Belongs to the protein kinase superfamily.
    
 0.620
CSNK1G1
Casein kinase 1 gamma 1; Belongs to the protein kinase superfamily.
    
 0.620
csnk1g1
Casein kinase 1, gamma 1; Belongs to the protein kinase superfamily.
    
 0.620
stard3
StAR-related lipid transfer (START) domain containing 3.
      
 0.528
Star
Steroidogenic acute regulatory protein, mitochondrial; Plays a key role in steroid hormone synthesis by enhancing the metabolism of cholesterol into pregnenolone. Mediates the transfer of cholesterol from the outer mitochondrial membrane to the inner mitochondrial membrane where it is cleaved to pregnenolone.
      
 0.524
stard7
StAR-related lipid transfer (START) domain containing 7.
      
 0.521
stard5
StAR-related lipid transfer (START) domain containing 5.
      
 0.521
LOC103025147
VAMP (vesicle-associated membrane protein)-associated protein A, like.
    
 0.487
VAPA
VAMP associated protein A.
    
 0.487
Your Current Organism:
Astyanax mexicanus
NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish
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