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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CALML6Calmodulin like 6. (165 aa)    
Predicted Functional Partners:
LOC103045689
Calcium/calmodulin-dependent protein kinase II alpha; Belongs to the protein kinase superfamily.
    
 0.953
Nos1
Nitric oxide synthase; Produces nitric oxide (NO).
    
 0.941
LOC103031688
Nitric oxide synthase; Produces nitric oxide (NO).
    
 0.941
NOS2
Nitric oxide synthase; Produces nitric oxide (NO).
    
 0.941
ENSAMXP00000031931
Phosphodiesterase.
    
 0.940
PDE1C
Phosphodiesterase.
    
 0.940
W5L4K8_ASTMX
Cyclic nucleotide gated channel beta 1a.
   
 0.938
LOC103023937
Phosphorylase kinase, gamma 1b (muscle); Belongs to the protein kinase superfamily.
    
 0.932
phkg2
Phosphorylase kinase, gamma 2 (testis); Belongs to the protein kinase superfamily.
    
 0.932
LOC103046290
Phosphorylase kinase, gamma 1a (muscle); Belongs to the protein kinase superfamily.
    
 0.932
Your Current Organism:
Astyanax mexicanus
NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish
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