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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
zdhhc2Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family. (380 aa)    
Predicted Functional Partners:
Ckap4
Uncharacterized protein.
   
 
 0.636
zdhhc21
Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.
     
0.582
ska2
Spindle and kinetochore associated complex subunit 2.
   
 
 0.521
ska1
Spindle and kinetochore associated complex subunit 1.
   
 
 0.512
LOC103031223
Uncharacterized protein.
    
 
 0.505
CLSPN
Claspin.
   
 
 0.491
timeless
Timeless circadian clock.
   
 
 0.414
smarcal1
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a-like 1; Belongs to the SNF2/RAD54 helicase family. SMARCAL1 subfamily.
    
 
 0.413
W5K7T2_ASTMX
Zinc finger, RAN-binding domain containing 3.
    
 
 0.413
Your Current Organism:
Astyanax mexicanus
NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.