LOC103023872 protein (Astyanax mexicanus) - STRING interaction network

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Score

LOC103023872

RNA binding motif protein 5. (707 aa)

Predicted Functional Partners:

SUGP1

0.804

dhx15

0.708

W5LR04_ASTMX

0.706

LOC103026862

0.694

LOC103024792

0.694

Dhx38

0.659

ddx10

0.651

ENSAMXP00000043880

0.644

nol6

0.643

Ncbp2

0.635

Your Current Organism:

Astyanax mexicanus

NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Dhx38	ENSAMXP00000043880	ENSAMXP00000004531	ENSAMXP00000043880	DEAH (Asp-Glu-Ala-His) box polypeptide 38.	G patch domain and KOW motifs.	0.975
Dhx38	LOC103023872	ENSAMXP00000004531	ENSAMXP00000008375	DEAH (Asp-Glu-Ala-His) box polypeptide 38.	RNA binding motif protein 5.	0.659
Dhx38	LOC103024792	ENSAMXP00000004531	ENSAMXP00000052965	DEAH (Asp-Glu-Ala-His) box polypeptide 38.	U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family.	0.792
Dhx38	LOC103026862	ENSAMXP00000004531	ENSAMXP00000043126	DEAH (Asp-Glu-Ala-His) box polypeptide 38.	U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family.	0.792
Dhx38	Ncbp2	ENSAMXP00000004531	ENSAMXP00000039041	DEAH (Asp-Glu-Ala-His) box polypeptide 38.	Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...]	0.946
Dhx38	SUGP1	ENSAMXP00000004531	ENSAMXP00000033317	DEAH (Asp-Glu-Ala-His) box polypeptide 38.	SURP and G-patch domain containing 1.	0.498
Dhx38	dhx15	ENSAMXP00000004531	ENSAMXP00000046697	DEAH (Asp-Glu-Ala-His) box polypeptide 38.	DEAH (Asp-Glu-Ala-His) box helicase 15.	0.565
Dhx38	nol6	ENSAMXP00000004531	ENSAMXP00000008098	DEAH (Asp-Glu-Ala-His) box polypeptide 38.	Nucleolar protein 6.	0.667
ENSAMXP00000043880	Dhx38	ENSAMXP00000043880	ENSAMXP00000004531	G patch domain and KOW motifs.	DEAH (Asp-Glu-Ala-His) box polypeptide 38.	0.975
ENSAMXP00000043880	LOC103023872	ENSAMXP00000043880	ENSAMXP00000008375	G patch domain and KOW motifs.	RNA binding motif protein 5.	0.644
ENSAMXP00000043880	dhx15	ENSAMXP00000043880	ENSAMXP00000046697	G patch domain and KOW motifs.	DEAH (Asp-Glu-Ala-His) box helicase 15.	0.562
LOC103023872	Dhx38	ENSAMXP00000008375	ENSAMXP00000004531	RNA binding motif protein 5.	DEAH (Asp-Glu-Ala-His) box polypeptide 38.	0.659
LOC103023872	ENSAMXP00000043880	ENSAMXP00000008375	ENSAMXP00000043880	RNA binding motif protein 5.	G patch domain and KOW motifs.	0.644
LOC103023872	LOC103024792	ENSAMXP00000008375	ENSAMXP00000052965	RNA binding motif protein 5.	U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family.	0.694
LOC103023872	LOC103026862	ENSAMXP00000008375	ENSAMXP00000043126	RNA binding motif protein 5.	U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family.	0.694
LOC103023872	Ncbp2	ENSAMXP00000008375	ENSAMXP00000039041	RNA binding motif protein 5.	Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...]	0.635
LOC103023872	SUGP1	ENSAMXP00000008375	ENSAMXP00000033317	RNA binding motif protein 5.	SURP and G-patch domain containing 1.	0.804
LOC103023872	W5LR04_ASTMX	ENSAMXP00000008375	ENSAMXP00000025225	RNA binding motif protein 5.	RNA binding motif protein 25b.	0.706
LOC103023872	ddx10	ENSAMXP00000008375	ENSAMXP00000006305	RNA binding motif protein 5.	RNA helicase.	0.651
LOC103023872	dhx15	ENSAMXP00000008375	ENSAMXP00000046697	RNA binding motif protein 5.	DEAH (Asp-Glu-Ala-His) box helicase 15.	0.708