Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
W5KLL6_ASTMXVon Willebrand factor A domain containing 7. (458 aa)    
Predicted Functional Partners:
snapc4
Small nuclear RNA activating complex, polypeptide 4.
      
 0.574
phf5a
PHD finger protein 5A.
      
 0.487
ENSAMXP00000051362
Cardiomyopathy associated 5.
     
 0.413
ENSAMXP00000035240
Uncharacterized protein.
      
 0.410
LOC103024442
Gon-4-like (C. elegans).
      
 0.410
W5KH70_ASTMX
PRP4 pre-mRNA processing factor 4 homolog (yeast).
      
 0.409
Your Current Organism:
Astyanax mexicanus
NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish
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