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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103025953Calcium binding protein 39, like 1. (343 aa)    
Predicted Functional Partners:
stk11
Serine/threonine kinase 11; Belongs to the protein kinase superfamily.
    
 0.988
prkaa2
Non-specific serine/threonine protein kinase.
    
 0.959
prkaa1
Non-specific serine/threonine protein kinase.
    
 0.959
STRADB
STE20 related adaptor beta.
    
 0.958
strada
STE20 related adaptor alpha.
    
 0.958
cab39l
Calcium binding protein 39-like.
  
  
 
0.901
LOC103021644
Serine/threonine kinase 25a.
    
 
 0.687
STK24
Serine/threonine kinase 24.
    
 
 0.687
LOC103028447
Serine/threonine kinase 24b (STE20 homolog, yeast).
    
 
 0.687
stk26
Serine/threonine protein kinase 26.
    
 
 0.687
Your Current Organism:
Astyanax mexicanus
NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish
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