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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Vps37aVPS37A subunit of ESCRT-I. (384 aa)    
Predicted Functional Partners:
vps28
Vacuolar protein sorting-associated protein 28 homolog; Component of the ESCRT-I complex (endosomal sorting complex required for transport I), a regulator of vesicular trafficking process.
   
 0.980
mvb12a
Uncharacterized protein.
   
 0.942
mvb12b
Multivesicular body subunit 12Ba.
   
 0.913
ENSAMXP00000044563
MABP domain-containing protein.
   
 0.913
ENSAMXP00000050291
Multivesicular body subunit 12Bb.
   
 0.913
vps25
Vacuolar protein sorting 25 homolog.
    
 0.905
W5KJZ4_ASTMX
Tumor susceptibility 101b.
   
 0.893
tsg101
Tumor susceptibility 101a.
   
 0.893
ENSAMXP00000048109
Zgc:123278.
   
 0.893
vps36
Vacuolar protein sorting 36 homolog.
     
 0.889
Your Current Organism:
Astyanax mexicanus
NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish
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