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The next version of STRING is ready for use in your analyses: updated networks across STRING newly available directed regulatory networks a new typed view showing functional, physical, and regulatory edges in one network new clustering options and cluster-based layouts … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Apba1Amyloid beta (A4) precursor protein-binding, family A, member 1a. (885 aa)    
Predicted Functional Partners:
W5L1R1_ASTMX
Calcium/calmodulin-dependent serine protein kinase b; Belongs to the MAGUK family.
   
 0.951
Cask
Calcium/calmodulin-dependent serine protein kinase a; Belongs to the MAGUK family.
   
 0.951
Mpp1
Membrane protein, palmitoylated 1; Belongs to the MAGUK family.
   
 0.784
stxbp1
Syntaxin binding protein 1a; Belongs to the STXBP/unc-18/SEC1 family.
   
 0.745
W5L8D5_ASTMX
Syntaxin binding protein 1b; Belongs to the STXBP/unc-18/SEC1 family.
   
 0.737
stxbp2
Syntaxin binding protein 2; Belongs to the STXBP/unc-18/SEC1 family.
   
 0.737
RIMS2
Regulating synaptic membrane exocytosis 2.
   
 
 0.681
RIMS2-2
Regulating synaptic membrane exocytosis 2.
   
 
 0.681
stxbp3
Syntaxin binding protein 3; Belongs to the STXBP/unc-18/SEC1 family.
    
 0.675
mpp6
Membrane protein, palmitoylated 6a (MAGUK p55 subfamily member 6); Belongs to the MAGUK family.
   
 0.656
Your Current Organism:
Astyanax mexicanus
NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish
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